Insertion junction: CLIP2.064911_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064911
Chromosome:chromosome 9
Location:4782236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402441 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCAGAAAATAAAACACCTCTCCCCTCTCCCGCGGTCAGTGCGACGCT
Internal bar code:CACGGTCATGGGTAGCTTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGACCTCCCTCAGCAGGT
Suggested primer 2:TATCAGCTACCCGGTGTCCA