Insertion junction: CLIP2.064914_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064914
Chromosome:chromosome 6
Location:3109619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275400 (1 of 1) PTHR10331 - T COMPLEX PROTEIN 10 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGGGAATCGCAGAGATGAAGGACAGAAGGAGAGAGGCGCCCTGTAG
Internal bar code:AATTCCGACCGATCATTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGCCATAGCGAAATCG
Suggested primer 2:TTTTACTCGGAGGTGGGCAC