Insertion junction: CLIP2.064916_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064916
Chromosome:chromosome 2
Location:7707047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147050 (1 of 7) PF05517 - p25-alpha (p25-alpha); P25 Alpha Domain Containing Flagellar Associated Protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGCAGGAACCCCGCACCCGGCGACAGCGCAGAGGCCCTGGTGCTCG
Internal bar code:TTCGGTTTAGTGGTTGGATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTCAGGCACCAACGTG
Suggested primer 2:TCAGCCCAGTCGTTCAGAAC