Insertion junction: CLIP2.064919_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064919
Chromosome:chromosome 16
Location:5771970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680400 3'UTR
Cre16.g680450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAACCCTAGGGGACTCCACCAACCTGCCTAAACACTGTCCTGTCACAC
Internal bar code:TGGGAACCGCCGTAAGATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGGAGCAAGGCCAAG
Suggested primer 2:GGATTGGTGGGTGAGGGAAG