Insertion junction: CLIP2.064919_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064919
Chromosome:chromosome 16
Location:5771971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680400 3'UTR
Cre16.g680450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGCCCAGACCCCAGCAGATGGGTGAGATGGCAGACAATTTGCAACG
Internal bar code:TGGAAAGATGATCTAAGTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGGTGGGTGAGGGAAG
Suggested primer 2:TCATGAGGAGCAAGGCCAAG