Insertion junction: CLIP2.064933_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064933
Chromosome:chromosome 13
Location:961297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAGCTGTCGGCACGCCACGAACCCGACCAGGCTGCGCTGCTTAGCTG
Internal bar code:AGACCGAGTCTTCAGGTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCATACTTCCCATCTCG
Suggested primer 2:TACGCTGAGACTGCCAAAGG