Insertion junction: CLIP2.064941_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064941
Chromosome:chromosome 16
Location:7326528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678997 (1 of 2) 2.4.2.38 - Glycoprotein 2-beta-D-xylosyltransferase / Beta-1,2-xylosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCACAAAAAGCACCGCATGAAGAAAGGTTACGGTACGCACGACTGG
Internal bar code:AAATTTGATGATTATTATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATATGGCGGGATGTGTG
Suggested primer 2:GGGAGGTCACAAGTAACGCA