Insertion junction: CLIP2.064948_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064948
Chromosome:chromosome 12
Location:5458163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529800 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGTGATGTAGTTTCCGATCGTCCGGAAGCCTGTCTGGACGGACG
Internal bar code:CCGGCGCGCCTGTTGTATTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGCTATCGCTGCTGAG
Suggested primer 2:GACACCTCAACCGTGTTTGC