Insertion junction: CLIP2.064951_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064951
Chromosome:chromosome 3
Location:5205766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181650 (1 of 1) PTHR20973//PTHR20973:SF0 - NON-SMC ELEMENT 1-RELATED // NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 1 HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGTAGCCGGGGGCCGTGAGGGCATGACTGAACGTCCAGAGTCCCTCG
Internal bar code:TGCTTTAGGCGTATGCCCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCCTATCCACGCTGTC
Suggested primer 2:TATTTCCAGCGCGCCCTAAT