Insertion junction: CLIP2.064960_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064960
Chromosome:chromosome 3
Location:6732580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196150 uL5m,MRPL5 (1 of 3) IPR022803 - Ribosomal protein L5 domain; Mitochondrial ribosomal protein L5 3'UTR
Cre03.g196200 (1 of 2) PTHR17630//PTHR17630:SF32 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAAGCCACGATGCAGACATGGGGCTGCTAGGCACGCTGCTGGCCCAT
Internal bar code:TTACCGAGCTATTCGAGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3766
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCGACCCCAGCTATGT
Suggested primer 2:TGAGGACCCTTAGGAGAGGC