Insertion junction: CLIP2.064960_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064960
Chromosome:chromosome 3
Location:6732605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196150 uL5m,MRPL5 (1 of 3) IPR022803 - Ribosomal protein L5 domain; Mitochondrial ribosomal protein L5 3'UTR
Cre03.g196200 (1 of 2) PTHR17630//PTHR17630:SF32 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTACTATATCTACATGCGACCAGAAAACACGCGAGCGTTGAGAAGCAA
Internal bar code:TTACCGAGCTATTCGAGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGACCCTTAGGAGAGGC
Suggested primer 2:CAAACCGACCCCAGCTATGT