Insertion junction: CLIP2.064962_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064962
Chromosome:chromosome 9
Location:4382879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400293 (1 of 10) IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 3'UTR
Cre09.g400330 ALK6 Aurora-like kinase; (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGCGCGCAGGGCTGCCCAACTGGAAGGAACTGGGTGGATTGTGGTG
Internal bar code:TTAGTTCCATCGACTTGTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTAGCTGCGGGTTAGCA
Suggested primer 2:TTGCTTTGGTGACGGCATTG