Insertion junction: CLIP2.064973_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064973
Chromosome:chromosome 10
Location:1823292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430850 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACGGCTACTATGGTTTGGAGCTACGAGAAGGCGACCTGAAAGGCCGT
Internal bar code:GGTCTCGATTACCTGGGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGCACTAGATACAGGCC
Suggested primer 2:GCAGTAGGAGCGTTGGAACT