Insertion junction: CLIP2.064982_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064982
Chromosome:chromosome 7
Location:4349132
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g341150 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGGCGGCGCAGGTGGCAGCAGCGATGGCGACCGGATGCAGGGTGT
Internal bar code:TTCCATGTAGGGGGGTGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAATGACAAACACCAT
Suggested primer 2:AGCAGGATAGGCAATCACCG