Insertion junction: CLIP2.064996_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064996
Chromosome:chromosome 8
Location:1572004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365450 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGGGGGGTGTGACTTAACGCGGCCGCGCACCCTCCCACCATCCGCGG
Internal bar code:TGCGGTATGGACGCGGTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCATTAGGACGCACCAC
Suggested primer 2:GAGCCTTTTGTGCTTGCGAA