Insertion junction: CLIP2.065002_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065002
Chromosome:chromosome 11
Location:851584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467645 (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 5'UTR_intron
Cre11.g801245 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCACTAGATCCACGCGCAAAGCACGGTAGCAGGCTGCTCGCGGGCGG
Internal bar code:CCACAATTTTCTCTGCAGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGTTCCGTGCCATCGA
Suggested primer 2:GTTCCGGCTTTGACCCTACA