Insertion junction: CLIP2.065005_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065005
Chromosome:chromosome 7
Location:543142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain intron
Cre07.g800770 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCTCACCCTAATAAGACGCCGCAGAATGCTGAAGTTGGTGTTTTTGC
Internal bar code:TCTAAGAGCGGTTGAGTGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2657
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCCGTTTCAAATTGTT
Suggested primer 2:GAGCAGTCGGAGGATACGTG