Insertion junction: CLIP2.065006_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065006
Chromosome:chromosome 12
Location:8370452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550553 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTAGCTGGTCTGCTGTGTTGTGGAGGTCGGTTCACTGCGGCCTGTGTG
Internal bar code:TGATCTCGGTTTTTACCGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2428
LEAP-Seq percent confirming:63.7931
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTCCGAAGCCCTGATC
Suggested primer 2:GCGCTGTTTCTTATCAGGCG