Insertion junction: CLIP2.065009_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065009
Chromosome:chromosome 2
Location:6177198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTGAGTTACAATAGTGTTGCAGCTGTGGGTATTCCTCTGTCCCGGGC
Internal bar code:TGAGTAAAGTCTCCCCCTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2102
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCAGTGTTTGTGAAGGC
Suggested primer 2:ATTCGGAACATGGGAACGCT