Insertion junction: CLIP2.065012_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065012
Chromosome:chromosome 3
Location:7460096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205750 (1 of 2) K18272 - protein XRP2 (RP2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGGAATCTGGAGGAGAGTATCAAGTGCGGGGGCAGCTGCTGGCCAG
Internal bar code:CATTTATTCGGGTCGGTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACAACCCTTGCCTTTG
Suggested primer 2:CAGGTGGGCGATTACTGGTT