Insertion junction: CLIP2.065014_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065014
Chromosome:chromosome 12
Location:1975511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511150 GPD1 (1 of 1) PTHR11728:SF13 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 2, CHLOROPLASTIC; Glycerol-3-phosphate dehydrogenase/dihydroxyacetone-3-phosphate reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAGTGGCCGTATGTCCAGGATCAAGCATCAACATAAGGTGGCGATA
Internal bar code:AGGAGACTGAAAATGTGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:5366
LEAP-Seq percent confirming:98.0198
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:GATTTGCCTTGGGACGAGGA
Suggested primer 2:TCAGGGTAGCGTGAGAGTCA