Insertion junction: CLIP2.065025_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065025
Chromosome:chromosome 3
Location:1321012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150400 PIGU1,PIGU,LRG5 GPI transamidase subunit PIG-U; (1 of 1) K05293 - phosphatidylinositol glycan, class U (PIGU) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCATTGGAAATGGGACAGAGCTCCTTGGGTGAGATTGTGTGTTACGGT
Internal bar code:GACATGCGAAGGTTTATTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2306
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCGGGTAGAAATGCTGA
Suggested primer 2:CATCACATTGCTGTACGGCG