Insertion junction: CLIP2.065025_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065025
Chromosome:chromosome 3
Location:1321015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150400 PIGU1,PIGU,LRG5 GPI transamidase subunit PIG-U; (1 of 1) K05293 - phosphatidylinositol glycan, class U (PIGU) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGTCCGCTGTCTTTGTTCCCAACCCGCCTTTGCGCAACCGGCTCTCA
Internal bar code:GACATGCGAAGGTTTATTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1407
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACATTGCTGTACGGCG
Suggested primer 2:AACGCGGGTAGAAATGCTGA