Insertion junction: CLIP2.065028_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065028
Chromosome:chromosome 9
Location:5871820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTACAGTCAAGAGCCGCATAGTAAACGAATGGGAATCACGGGCAACG
Internal bar code:AGAGCGCATCCACCTGCAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2171
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATTGTGCCGCAGTTTG
Suggested primer 2:CTGCCAACAGTCACTGCAAC