Insertion junction: CLIP2.065031_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065031
Chromosome:chromosome 3
Location:9105279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201103 RAA7 psaA mRNA trans-splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCAACAAAAATGACCAAAAAATTACAAAAATCGACTGTAAGCTAAGC
Internal bar code:AGGACGTGCATTCGGAGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTGGAGTGCATGCTG
Suggested primer 2:AAAAACCGTCGGCATTGTGG