Insertion junction: CLIP2.065039_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065039
Chromosome:chromosome 2
Location:5958264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118050 CYCU1 U-type cyclin; (1 of 1) PTHR15615:SF20 - CYCLIN FAMILY PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTTTGACTAGTTTCTGTGAGGCCGGGCATCCTTTATTGCTTGGGTGC
Internal bar code:CATAAGCGCATACGATTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCGCGAACTCGTATCGA
Suggested primer 2:CGGAGGAGGAGAAGGAGGAA