Insertion junction: CLIP2.065049_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065049
Chromosome:chromosome 10
Location:5767835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459950 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTTCACAACCAGCTCGACCTACACACCCCAAACTCCCCCCGCTGCAG
Internal bar code:TGTAAAGCACGTGTTCCTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACCAGTTCGTCCTTCA
Suggested primer 2:TATTGCATCGCTAGCGCAGA