Insertion junction: CLIP2.065052_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065052
Chromosome:chromosome 16
Location:3911165
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g689250 GTR23 (1 of 1) PF04564//PF06701 - U-box domain (U-box) // Mib_herc2 (MIB_HERC2); Putative ubiquitin-protein ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCACCGTCAGCGGCACGTTCAGCAGCTCGCGGCGCAGGGCGCGCAG
Internal bar code:CGTTGATCTTAGTGTTTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGAAGACCGTATAGCC
Suggested primer 2:ACTTAGTGGGCGGGATTTGG