Insertion junction: CLIP2.065055_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065055
Chromosome:chromosome 13
Location:959101
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g568176 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTTATGCGAGTTTTCGGAGGCTATCCATTACTGGCAAATTTCAGCC
Internal bar code:CCGGAGCATTCTAGGTTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:100
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTGCCTAGTCGCTCAC
Suggested primer 2:CATAGCATGCGTGTCAAGCC