Insertion junction: CLIP2.065056_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065056
Chromosome:chromosome 3
Location:8947203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204353 (1 of 1) K07952 - ADP-ribosylation factor related protein 1 (ARFRP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTGTGAATGCCTGCAGACTATCTGCCAAGCGTGTCAAACCACACCGC
Internal bar code:AGGTCTATGACTGTAATTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTCTGTATTGCTGGGTT
Suggested primer 2:TGGTAGAGAGAAGCCCCTCC