Insertion junction: CLIP2.065061_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065061
Chromosome:chromosome 12
Location:2235935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508700 ELG2 Exostosin-like glycosyltransferase; (1 of 1) K02367 - glucuronyl/N-acetylglucosaminyl transferase EXT2 (EXT2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGACGCGAACGAATCGGAAGGTGGCGATGGCGGTATGGACTATGGAC
Internal bar code:GATTTTGCTAGTGGCTCACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1559
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTTTTGGACCACTGGT
Suggested primer 2:GTGAAAGGGGCAAAAGCTGG