Insertion junction: CLIP2.065070_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065070
Chromosome:chromosome 6
Location:7844460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303483 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGACTAAATATCAGTTGTACGGTACGGTAATAGGAGGGCAAGAAAGGT
Internal bar code:TCGTAGGCGGGGAGGGTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGAGTGTGCAGTGTATGT
Suggested primer 2:TGAGTAGGGTGTATGGCGGA