Insertion junction: CLIP2.065071_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065071
Chromosome:chromosome 11
Location:3084290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475000 IFT121,IFT122B,FAP118 Intraflagellar Transport Protein 121; (1 of 1) PTHR16517:SF1 - WD REPEAT-CONTAINING PROTEIN 35 5'UTR
Cre11.g475050 (1 of 1) K17973 - N-terminal acetyltransferase B complex non-catalytic subunit (NAA25, MDM20) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACAAAAGCTCAACATAAAACTTCCGATGCACGCCTGGGATGCACTTG
Internal bar code:TAAGATCGTGTCGGGGTGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAGGAGGGATGGTGT
Suggested primer 2:CCATGCTTCAGAGACCCCAG