Insertion junction: CLIP2.065074_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065074
Chromosome:chromosome 16
Location:6756949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672602 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGCCGCTCCTTGGGAAAGCTAAACCCAGCAAGTCACGCTGCTTACT
Internal bar code:TGCGTTTAGGGCTTAGGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTGGCCGCTATATC
Suggested primer 2:CCAATGAGTCTTGCGTCCCT