Insertion junction: CLIP2.065076_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065076
Chromosome:chromosome 17
Location:5476131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739100 (1 of 1) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACAGCGCAGTTAACCCGTTTTGCGTGCAAACGTAGCCGCTTTAAAGC
Internal bar code:TCAACATCAGGTATGGGTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGAGCGACTGTTCACAA
Suggested primer 2:GCTCTTGCAGCGTTTGGAAA