Insertion junction: CLIP2.065081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065081
Chromosome:chromosome 6
Location:5837896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289300 (1 of 33) IPR013763 - Cyclin-like 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTACCCCGCAGACTCACACGGCGCTTGTGCCTACTGCAATCGCACGA
Internal bar code:GTCGTTAGTAGTGTACATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1766
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGCTCATCGAGAATCT
Suggested primer 2:CCAGGACTGACGTTCACGAA