Insertion junction: CLIP2.065084_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065084
Chromosome:chromosome 4
Location:2472249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAACTTAAGAGTTAGTGACTGGACACGATATAGCTAAAATGCATGTG
Internal bar code:TATTACCATTTAAATTTGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCGCCGCATTTACGAAG
Suggested primer 2:CTGTTATTTGGCAGGCGTGG