Insertion junction: CLIP2.065088_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065088
Chromosome:chromosome 1
Location:105115
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g000700 ZFR1 (1 of 2) PTHR14155//PTHR14155:SF170 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED; zinc finger protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCCAACCTGCGCCGCATCCTGGTGTCGGGCCTGCGCCGCCTGACCTA
Internal bar code:GCTTCCTCGTTAATTGTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCGCTCACACCGTTTG
Suggested primer 2:CATGTCTCACCTGACCCCAC