Insertion junction: CLIP2.065098_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065098
Chromosome:chromosome 9
Location:6137355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413100 (1 of 16) IPR005069//IPR029044 - Nucleotide-diphospho-sugar transferase // Nucleotide-diphospho-sugar transferases 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAACAAGAGCCGCGCTATTGGAGTCAGACTGGAAGTTACGCGGAACT
Internal bar code:GAAGTTAGGTGTGGCCGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGCACGGATGTCATC
Suggested primer 2:GTCTGTATCTCGCGATGGGG