Insertion junction: CLIP2.065105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065105
Chromosome:chromosome 6
Location:3216315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276600 HTR2 Histone H3; (1 of 35) K11253 - histone H3 (H3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCAAAAATGGCCCGCACCAAGCAGACTGCCCGCAAGTCCACCGGCG
Internal bar code:TAATTGTTGTATTTCCCAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTGGAAGGTGGTGTT
Suggested primer 2:TACGTGCCTTGTTTCCCCTC