Insertion junction: CLIP2.065123_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065123
Chromosome:chromosome 13
Location:761523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566700 (1 of 1) K11094 - U2 small nuclear ribonucleoprotein B'' (SNRPB2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAATGCTTTACCAGGCTTTACAGCACAAACAAAGAAACATGTGTCATC
Internal bar code:TTGTACGACGATTTTATTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGTGGAGGCGGAAAA
Suggested primer 2:GCGACTATGCTGCGAAACTG