Insertion junction: CLIP2.065124_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065124
Chromosome:chromosome 6
Location:7032590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297300 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCAGTCGATGCGGTCCAAGCCTGCGCGCAAGCCTGCGCGCAAGCC
Internal bar code:ATTATGCACTTGTTTTTGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGTGCGTAGGTGCTAG
Suggested primer 2:AGCAACTAACCGGTGTCCAG