Insertion junction: CLIP2.065127_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065127
Chromosome:chromosome 4
Location:1837480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCAGGTCGTCACCGCGACCTCATGCACTTCTTGCACCACCACTGCT
Internal bar code:CACTACTCGATTCAAGTGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCGTAGATGGGGATGG
Suggested primer 2:CTAGGGATGCGCCAGAGAAG