Insertion junction: CLIP2.065130_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065130
Chromosome:chromosome 17
Location:1139503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704100 3'UTR
Cre17.g704150 GDPD5,GDP5 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGCGGGGTACCCCCTGCAACGGCAGCAGCGCGACGGTGTGTATGTCC
Internal bar code:AGACAGGGATGTGTGGAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:15.7895
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACGATGAGGAGTTTGT
Suggested primer 2:CTTTGGCATCCCCATCCCTT