Insertion junction: CLIP2.065132_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065132
Chromosome:chromosome 6
Location:8450928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308500 CMP2,CMPS1 (1 of 1) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1); Carbamoyl phosphate synthase, small subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGCGACTAGTGTCTGGTGTGTATAGAATATGGCGGCAACATGACG
Internal bar code:CTTGCATAATTAGTCGGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1654
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCCCTTGTCTTCCCTT
Suggested primer 2:TCTGAGGCAAGGTAAAGGCG