Insertion junction: CLIP2.065137_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065137
Chromosome:chromosome 1
Location:337368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCCTACCCATCTGCGACTTTGTTAGTTATCAACTAAGTTCGCACC
Internal bar code:ACAAGGTGTAATTATCGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1703
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGAACACAGCAACGGC
Suggested primer 2:CAGTTGCCTCACAAGTTGCC