Insertion junction: CLIP2.065145_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065145
Chromosome:chromosome 16
Location:2197957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801904 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGGAGAACGCCTGCATATGGGATTGCTGCCAGGGGTGTGCAGCAAT
Internal bar code:TACCTAGAAGTTTGACACCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTACACACACACCCGC
Suggested primer 2:CGCTAGTAGCAGGGATGTCG