Insertion junction: CLIP2.065161_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065161
Chromosome:chromosome 2
Location:1970366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088050 RPP30,XRP30 Ribonuclease MRP subunit P30; (1 of 1) K03539 - ribonuclease P/MRP protein subunit RPP1 (RPP1, RPP30) 5'UTR
Cre02.g088100 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAAGATTATAGGAACCAGTTCGCAAGCCCACCTAGCACTCCCGCCCG
Internal bar code:CATTTAACTCTATGCGAGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCAACGAACACACGTG
Suggested primer 2:GTGCCCCACTCAGTCTCATC