Insertion junction: CLIP2.065161_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065161
Chromosome:chromosome 2
Location:1970368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088050 RPP30,XRP30 Ribonuclease MRP subunit P30; (1 of 1) K03539 - ribonuclease P/MRP protein subunit RPP1 (RPP1, RPP30) 5'UTR
Cre02.g088100 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATATTGCTACTGGCGGCGGCTAGCAACACATGCAAACTATTGCGGCAAA
Internal bar code:CACAGAGTCGTATAATTGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCCCACTCAGTCTCATC
Suggested primer 2:GACACCAACGAACACACGTG