Insertion junction: CLIP2.065174_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065174
Chromosome:chromosome 3
Location:6662645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACATACATACTTTGGGCACTCGACACGCGCAGTCTACATCATAAAGT
Internal bar code:TGTGGTACAGGAGTGTCGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAAAGTTTGCGGTTGG
Suggested primer 2:TCCCTCGTGCTTTTGGTCTC